gget
Unified CLI/Python interface for querying genomic, proteomic, structure, and expression data across 20+ bioinformatics databases; use when you need fast, scriptable retrieval by gene/protein IDs or keywords.
Veto GatesRequired pass for any deployment consideration
| Dimension | Result | Detail |
|---|---|---|
| Scientific Integrity | PASS | The archived evaluation kept the skill tied to retrieved records or indexed source material rather than invented scientific claims. |
| Practice Boundaries | PASS | The package stayed in retrieval, extraction, or evidence-organization scope rather than drifting into unsupported interpretation. |
| Methodological Ground | PASS | No methodological-grounding issue was recorded for gget in the archived evaluation. |
| Code Usability | PASS | The legacy evaluation did not preserve a usability failure in the packaged retrieval path. |
Core Capability85 / 100 — 8 Categories
Medical TaskExecution Average: 85.6 / 100 — Assertions: 15/20 Passed
The workflow for You need to search genes/proteins by keyword and species across... is present, though the archived execution was cut short by a timeout.
The packaged path for You want to fetch detailed metadata for one or many... remained intelligible, but the observed run timed out before completion.
The Unified wrapper (scripts/wrapper.py) exposing multiple gget... path is defined clearly, but this run was interrupted by a timeout.
The Gene/protein search and identifier resolution across multiple databases path is defined clearly, but this run was interrupted by a timeout.
The workflow for End-to-end case for Unified wrapper (scripts/wrapper.py) exposing... is present, though the archived execution was cut short by a timeout.
Key Strengths
- Primary routing is Evidence Insight with execution mode B
- Static quality score is 85/100 and dynamic average is 73.6/100
- Assertions and command execution outcomes are recorded per input for human review
- Execution verification summary: Script verification 1/1; adjustment=5. wrapper.py: OK