Data Analysis
neuropixels-analysis
86100Total Score
Core Capability
86 / 100
Functional Suitability
11 / 12
Reliability
10 / 12
Performance & Context
7 / 8
Agent Usability
14 / 16
Human Usability
8 / 8
Security
9 / 12
Maintainability
10 / 12
Agent-Specific
17 / 20
Medical Task
20 / 20 Passed
91End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and Allen/IBL-style curation; use when processing Neuropixels recordings or when users mention Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, drift/motion correction, or unit curation
4/4
87End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and Allen/IBL-style curation; use when processing Neuropixels recordings or when users mention Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, drift/motion correction, or unit curation
4/4
85Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via SpikeInterface
4/4
85Neuropixels-aware preprocessing:
4/4
85End-to-end case for Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via SpikeInterface
4/4
Veto GatesRequired pass for any deployment consideration
Skill Veto✓ All 4 gates passed
✓
Operational Stability
System remains stable across varied inputs and edge cases
PASS✓
Structural Consistency
Output structure conforms to expected skill contract format
PASS✓
Result Determinism
Equivalent inputs produce semantically equivalent outputs
PASS✓
System Security
No prompt injection, data leakage, or unsafe tool use detected
PASSResearch Veto✅ PASS — Applicable
| Dimension | Result | Detail |
|---|---|---|
| Scientific Integrity | PASS | The archived review kept this workflow anchored to supplied data fields and observable execution behavior, not fabricated results. |
| Practice Boundaries | PASS | The archived review kept this package within End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB)..., not freeform inference detached from source data. |
| Methodological Ground | PASS | Methodological grounding was preserved through the documented inputs, transformations, and expected artifacts. |
| Code Usability | PASS | The legacy audit did not record a code-usability failure in the packaged analysis path. |
Core Capability86 / 100 — 8 Categories
Functional Suitability
Related legacy finding for neuropixels-analysis: Improve stress-case output rigor. Stress and boundary scenarios show weaker consistency
11 / 12
92%
Reliability
Reliability was softened by the legacy issue 'Improve stress-case output rigor'. Stress and boundary scenarios show weaker consistency
10 / 12
83%
Performance & Context
Performance-context scoring suggests the package could handle larger or denser runs a little more gracefully.
7 / 8
88%
Agent Usability
Agent usability was strong, but the workflow could surface its entry conditions a little more directly.
14 / 16
88%
Human Usability
No point loss was recorded for human usability in the legacy audit.
8 / 8
100%
Security
A modest security gap remained in the archived evaluation despite otherwise controlled workflow behavior.
9 / 12
75%
Maintainability
Maintainability stayed solid, with only limited room to simplify scripts, dependencies, or packaging structure.
10 / 12
83%
Agent-Specific
Agent specific was softened by the legacy issue 'Improve stress-case output rigor'. Stress and boundary scenarios show weaker consistency
17 / 20
85%
Core Capability Total86 / 100
Medical TaskExecution Average: 86.6 / 100 — Assertions: 20/20 Passed
91
Canonical
End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and Allen/IBL-style curation; use when processing Neuropixels recordings or when users mention Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, drift/motion correction, or unit curation
4/4 ✓
87
Variant A
End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and Allen/IBL-style curation; use when processing Neuropixels recordings or when users mention Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, drift/motion correction, or unit curation
4/4 ✓
85
Edge
Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via SpikeInterface
4/4 ✓
85
Variant B
Neuropixels-aware preprocessing:
4/4 ✓
85
Stress
End-to-end case for Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via SpikeInterface
4/4 ✓
91
Canonical✅ Pass
End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and Allen/IBL-style curation; use when processing Neuropixels recordings or when users mention Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, drift/motion correction, or unit curation
End-to-end Neuropixels extracellular electrophysiology analysis... remained tied to the documented analysis contract even when the preserved evidence centered on instructions instead of a full rerun.
Basic 36/40|Specialized 55/60|Total 91/100
✅A1The neuropixels-analysis output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
87
Variant A✅ Pass
End-to-end Neuropixels extracellular electrophysiology analysis (SpikeGLX/Open Ephys/NWB) including preprocessing, motion correction, Kilosort4 spike sorting, QC metrics, and Allen/IBL-style curation; use when processing Neuropixels recordings or when users mention Neuropixels, SpikeGLX, Open Ephys, Kilosort, quality metrics, drift/motion correction, or unit curation
The archived run treated End-to-end Neuropixels extracellular electrophysiology analysis... as a bounded analysis workflow rather than a purely narrative instruction path.
Basic 34/40|Specialized 53/60|Total 87/100
✅A1The neuropixels-analysis output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
85
Edge✅ Pass
Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via SpikeInterface
Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via... remained tied to the documented analysis contract even when the preserved evidence centered on instructions instead of a full rerun.
Basic 33/40|Specialized 52/60|Total 85/100
✅A1The neuropixels-analysis output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
85
Variant B✅ Pass
Neuropixels-aware preprocessing:
The archived run treated Neuropixels-aware preprocessing: as a bounded analysis workflow rather than a purely narrative instruction path.
Basic 32/40|Specialized 53/60|Total 85/100
✅A1The neuropixels-analysis output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
85
Stress✅ Pass
End-to-end case for Multi-format ingestion: SpikeGLX, Open Ephys, and NWB readers via SpikeInterface
This stress case stayed within the packaged analysis boundary and kept a reviewable task contract.
Basic 29/40|Specialized 56/60|Total 85/100
✅A1The neuropixels-analysis output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
Medical Task Total86.6 / 100
Key Strengths
- Primary routing is Data Analysis with execution mode B
- Static quality score is 86/100 and dynamic average is 78.6/100
- Assertions and command execution outcomes are recorded per input for human review
- Execution verification summary: Script verification 0/6; adjustment=0. compute_metrics.py: rc=1; explore_recording.py: rc=1; export_to_phy.py: rc=1; neuropixels_pipeline.py: rc=1