Evidence Insight

pdb-database

86100Total Score
Core Capability
84 / 100
Functional Suitability
11 / 12
Reliability
9 / 12
Performance & Context
7 / 8
Agent Usability
14 / 16
Human Usability
8 / 8
Security
10 / 12
Maintainability
9 / 12
Agent-Specific
16 / 20
Medical Task
20 / 20 Passed
92Find protein/nucleic acid 3D structures by keywords, organism, experimental method, or resolution
4/4
88Identify related structures via sequence similarity (e.g., homolog search for modeling)
4/4
86Text and attribute-based search over RCSB PDB entries
4/4
86Sequence similarity search with configurable thresholds (e-value, identity)
4/4
86End-to-end case for Text and attribute-based search over RCSB PDB entries
4/4

Veto GatesRequired pass for any deployment consideration

Skill Veto✓ All 4 gates passed
✓
Operational Stability
System remains stable across varied inputs and edge cases
PASS
✓
Structural Consistency
Output structure conforms to expected skill contract format
PASS
✓
Result Determinism
Equivalent inputs produce semantically equivalent outputs
PASS
✓
System Security
No prompt injection, data leakage, or unsafe tool use detected
PASS
Research Veto✅ PASS — Applicable
DimensionResultDetail
Scientific IntegrityPASSThe legacy audit did not indicate that retrieval outputs were presented as unsupported findings.
Practice BoundariesPASSPractice boundaries held because the package remained focused on source handling, lookup, or structured evidence use.
Methodological GroundPASSThe older review treated the package logic as methodologically aligned with its stated workflow.
Code UsabilityN/AThe package is evaluated primarily as a structured deliverable rather than an executable scientific code workflow.

Core Capability84 / 100 — 8 Categories

Functional Suitability
Functional suitability was softened by the legacy issue 'Improve stress-case output rigor'. Stress and boundary scenarios show weaker consistency
11 / 12
92%
Reliability
The archived deduction in reliability traces back to: Improve stress-case output rigor. Stress and boundary scenarios show weaker consistency
9 / 12
75%
Performance & Context
A modest deduction remained in performance context for pdb-database in the archived review.
7 / 8
88%
Agent Usability
The legacy audit deducted points for pdb-database in agent usability.
14 / 16
88%
Human Usability
No point loss was recorded for human usability in the legacy audit.
8 / 8
100%
Security
The archived evaluation left some headroom for pdb-database under security.
10 / 12
83%
Maintainability
A modest deduction remained in maintainability for pdb-database in the archived review.
9 / 12
75%
Agent-Specific
The archived deduction in agent specific traces back to: Improve stress-case output rigor. Stress and boundary scenarios show weaker consistency
16 / 20
80%
Core Capability Total84 / 100

Medical TaskExecution Average: 87.6 / 100 — Assertions: 20/20 Passed

92
Canonical
Find protein/nucleic acid 3D structures by keywords, organism, experimental method, or resolution
4/4 ✓
88
Variant A
Identify related structures via sequence similarity (e.g., homolog search for modeling)
4/4 ✓
86
Edge
Text and attribute-based search over RCSB PDB entries
4/4 ✓
86
Variant B
Sequence similarity search with configurable thresholds (e-value, identity)
4/4 ✓
86
Stress
End-to-end case for Text and attribute-based search over RCSB PDB entries
4/4 ✓
92
Canonical✅ Pass
Find protein/nucleic acid 3D structures by keywords, organism, experimental method, or resolution

The archived run for Find protein/nucleic acid 3D structures by keywords, organism,... remained guidance-driven rather than command-driven.

Basic 36/40|Specialized 56/60|Total 92/100
✅A1The pdb-database output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
88
Variant A✅ Pass
Identify related structures via sequence similarity (e.g., homolog search for modeling)

The archived run for Identify related structures via sequence similarity (e.g., homolog... remained guidance-driven rather than command-driven.

Basic 34/40|Specialized 54/60|Total 88/100
✅A1The pdb-database output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
86
Edge✅ Pass
Text and attribute-based search over RCSB PDB entries

Text and attribute-based search over RCSB PDB entries was evaluated as a bounded documentation path, not as a runnable script workflow.

Basic 33/40|Specialized 53/60|Total 86/100
✅A1The pdb-database output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
86
Variant B✅ Pass
Sequence similarity search with configurable thresholds (e-value, identity)

The archived run for Sequence similarity search with configurable thresholds (e-value,... remained guidance-driven rather than command-driven.

Basic 32/40|Specialized 54/60|Total 86/100
✅A1The pdb-database output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
86
Stress✅ Pass
End-to-end case for Text and attribute-based search over RCSB PDB entries

This stress case stayed inside the documented workflow and remained instruction-led.

Basic 29/40|Specialized 57/60|Total 86/100
✅A1The pdb-database output structure matches the documented deliverable
✅A2The instruction path remains actionable for the documented case
✅A3The output stays fully within the documented skill boundary
✅A4The response quality is acceptable for the documented path
Pass rate: 4 / 4
Medical Task Total87.6 / 100

Key Strengths

  • Primary routing is Evidence Insight with execution mode A
  • Static quality score is 84/100 and dynamic average is 79.6/100
  • Assertions and command execution outcomes are recorded per input for human review
  • Execution verification summary: No script verification was applicable